TNucleus.h

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#ifndef TNUCLEUS_H
#define TNUCLEUS_H
 
#include <iostream>
#include <cmath>
#include <cstring>
#include <iomanip>
#include <cstdlib>
#include <fstream>
#include <string>
 
#include "TTransition.h"
 
#include "TObject.h"
#include "TNamed.h"
#include "TSortedList.h"
 
/////////////////////////////////////////////////////////////////
///
/// \class TNucleus
///
/// This class builds a nucleus and sets all the basic information
/// (mass, Z, symbol, radius, etc.)
///
/////////////////////////////////////////////////////////////////
 
class TNucleus : public TNamed {
public:
   TNucleus() = default;                                                  ///< Should not be used, here so we can write things to a root file.
   explicit TNucleus(const char* name);                                   ///< Creates a nucleus based on symbol and sets all parameters from mass.dat
   TNucleus(int charge, int neutrons, double mass, const char* symbol);   ///< Creates a nucleus with Z, N, mass, and symbol
   TNucleus(int charge, int neutrons, const char* MassFile = nullptr);    ///< Creates a nucleus with Z, N using mass table (default MassFile = "mass.dat")
   TNucleus(const TNucleus&)                = delete;
   TNucleus(TNucleus&&) noexcept            = delete;
   TNucleus& operator=(const TNucleus&)     = delete;
   TNucleus& operator=(TNucleus&&) noexcept = delete;
 
   ~TNucleus();
 
   static void ParseName(const char* name, std::string& symbol, int& number, std::string& element)
   {
      return ParseName(std::string(name), symbol, number, element);
   }
   static void        ParseName(std::string name, std::string& symbol, int& number, std::string& element);
   static std::string SortName(const char* input)
   {
      std::string tmp(input);
      return SortName(tmp);
   }
   static std::string SortName(std::string input);
   void               SetZ(int);                ///< Sets the Z (# of protons) of the nucleus
   void               SetN(int);                ///< Sets the N (# of neutrons) of the nucleus
   void               SetMassExcess(double);    ///< Sets the mass excess of the nucleus (in MeV)
   void               SetMass(double);          ///< Sets the mass manually (in MeV)
   void               SetMass();                ///< Sets the mass based on the A and mass excess of nucleus (in MeV)
   void               SetSymbol(const char*);   ///< Sets the atomic symbol for the nucleus
 
   void AddTransition(Double_t energy, Double_t intensity, Double_t energy_uncertainty = 0.0, Double_t intensity_uncertainty = 0.0);
   void AddTransition(TTransition* tran);
 
   int         GetZ() const { return fZ; }                     ///< Gets the Z (# of protons) of the nucleus
   int         GetN() const { return fN; }                     ///< Gets the N (# of neutrons) of the nucleus
   int         GetA() const { return fN + fZ; }                ///< Gets the A (Z + N) of the nucleus
   double      GetMassExcess() const { return fMassExcess; }   ///< Gets the mass excess of the nucleus (in MeV)
   double      GetMass() const { return fMass; }               ///< Gets the mass of the nucleus (in MeV)
   const char* GetSymbol() const { return fSymbol.c_str(); }   ///< Gets the atomic symbol of the nucleus
 
   // Returns total kinetic energy in MeV
   double GetEnergyFromBeta(double beta) const;
   double GetBetaFromEnergy(double energy_MeV) const;
 
   TTransition* GetTransition(Int_t idx) { return GetTransitionByIntensity(idx); }
   TTransition* GetTransitionByIntensity(Int_t idx);
   TTransition* GetTransitionByEnergy(Int_t idx);
 
   Int_t  NTransitions() const { return fTransitionListByIntensity.GetSize(); };
   Int_t  GetNTransitions() const { return fTransitionListByIntensity.GetSize(); };
   double GetRadius() const;
   int    GetZfromSymbol(char*);
 
   void Print(Option_t* opt = "") const override;
   void WriteSourceFile(const std::string& outfilename = "");
 
   const TSortedList* GetTransitionList() const { return GetTransitionListByIntensity(); }
   const TSortedList* GetTransitionListByIntensity() const { return &fTransitionListByIntensity; }
   const TSortedList* GetTransitionListByEnergy() const { return &fTransitionListByEnergy; }
 
   bool operator==(const TNucleus& rhs) const { return ((fA == rhs.fA) && (fN == rhs.fN) && (fZ == rhs.fZ)); }
   bool operator!=(const TNucleus& rhs) const { return !(*this == rhs); }
 
private:
   static std::string& Massfile();   ///< Returns the massfile to be used, which includes Z, N, atomic symbol, and mass excess
   void                SetName(const char* name = "") override;
 
   int         fA{0};             ///< Number of nucleons (Z + N)
   int         fN{0};             ///< Number of neutrons (N)
   int         fZ{0};             ///< Number of protons (Z)
   double      fMass{0.};         ///< Mass (in MeV)
   double      fMassExcess{0.};   ///< Mass excess (in MeV)
   std::string fSymbol;           ///< Atomic symbol (ex. Ba, C, O, N)
 
   TSortedList fTransitionListByIntensity;
   TSortedList fTransitionListByEnergy;
   bool        LoadTransitionFile();
 
   /// \cond CLASSIMP
   ClassDefOverride(TNucleus, 2)   // NOLINT(readability-else-after-return)
   /// \endcond
};
 
#endif